Sequence & Structure motif occurrences in the input sequences

Sequence title Sequence index Start position Occurrence
chr12:1310093-1310271:+ 1 57 gCAUAcauauauaUUUGCacg
chr10:102767508-102767558:+ 4 9 UUUCACuuguauaUUUUUCAC
chr10:102767508-102767558:+ 4 36 AAUUUCUuguacaaACCCAAA
chr1:234742792-234742831:- 7 27 AUauauauauauaUCcaag  
chr11:85372839-85372905:- 11 28 caUUuuguauauaUUUCUUug
chr11:85372839-85372905:- 11 42 UUCUUuguauauaaUUUuguG
chr20:34636206-34636250:- 12 9 UAUACuguauauaUUGuauau
chr7:912969-913018:+ 14 19 UUAUUUUuguacaUUUUugua
chr7:912969-913018:+ 14 29 acaUUUUuguauaUACUGGga
chr22:35690657-35690730:+ 30 54 UUCUguauauauaauuUAAUA
chr3:193856194-193856239:+ 33 22 AUAuuuguauauaUUUUAUAU
chr7:27235801-27235895:- 37 56 GUAAauauauauaauaugugu
chr17:48211161-48211215:- 56 36 UAUauaauauauaUAUGuaug
chr11:57467876-57467918:+ 57 12 CAuauaauauauaUAUAuaua
chr20:58522073-58522126:+ 58 23 GUGUauauguauaUAUACUCc
chrX:107963190-107963282:- 63 33 guuUauauauauaUGUAUAUC
chr4:71895926-71896026:+ 67 77 aguucUGuauauaaauauAUU
chr10:97921876-97921956:+ 81 42 UUaagucuguacaUAUUUUug
chr5:145667552-145667620:+ 93 45 CUUaaacuguauaaUUUugua
chr22:35689741-35689805:+ 94 56 uaCAauauauacaUA      
chr12:53805403-53805465:+ 99 52 AUAUauauauauaaAGA    
chr1:184659689-184659733:- 104 20 caaAAUguauauaaucCUgua
chr6:7609701-7609755:+ 117 27 uaCAAAUuauauaUauguaCA
chr6:43588240-43588331:- 125 51 AUAUguauauauaUUUAAAUA
chr5:154193907-154193952:+ 143 21 uuUuauauauauaUACAuaua
chr5:154193907-154193952:+ 143 35 ACAuauauauauaUCaa    
chr20:55744023-55744103:- 172 19 cAUCAuuuguacaUuuaAACC
chr12:7051366-7051418:+ 179 31 AAUAAUuuauauaUauAAAUa
chr10:112772428-112772522:+ 182 31 CACAaucuauauaUguauAUA
chr7:156797633-156797677:- 183 34 GUAUUUauauauaaaaa    
chr6:26523354-26523398:+ 185 26 UauaUaauguacaUAAaggac
chr5:74074540-74074615:- 204 20 cUUUUUauguacaUACGugua
chr20:62588228-62588276:- 213 19 aACCAUauauauaUACAuaua
chr18:46446443-46446482:- 219 8 uaUGUUauauauaaauaUAUU
chr1:205055711-205055750:- 241 16 caAUAUAuguauaUucUCUUC
chr8:79629899-79629927:+ 247 10 cauauaCuguauaUAAUAAAU
chr12:57910403-57910445:- 267 9 CUCAGCUuguauaUAGAGAUu
chr12:57910403-57910445:- 267 22 UAGAGAUuguacaUUUAUUUA
chr7:140033776-140033821:- 273 23 aUCAUucuguauaUACAUAUU
chr3:141167218-141167256:+ 280 13 guAauUCuguauaUUCuauac
chr2:43450545-43450583:- 281 1        uauacaaUGAAAAU
chr1:45116515-45116578:+ 284 36 uUCCCCauguacaUACaugca
chr1:157091178-157091246:- 290 25 gUguauAuguacaUAAAAUGu
chr14:102393939-102393995:+ 295 29 UUAauauuguacaUACAUugu
chr3:111711048-111711132:+ 311 10 AAUAcuuuauauaauguAUAA
chr3:111711048-111711132:+ 311 28 UAAaguAuauauaauauaAUA
chr14:23369973-23370035:- 321 12 guGuCUGuguacaUAAauaua
chr4:78088106-78088184:+ 337 48 uuuAAAAuguacaUAAAauac
chr14:20825856-20825908:+ 358 30 UAuauuguauauaaccCCAAC
chr14:101512301-101512327:+ 359 4     gaauauacaagggcAAg
chr13:110406470-110406542:- 362 15 UUCacaAuguauaUugggucU
chr12:97345980-97346030:+ 363 17 AAAAAUAuguauaUuuuuAUA
chr4:85592629-85592670:- 382 21 AUAuauAuauauaauauauau
chr1:56960782-56960835:- 390 12 ugaUUuuuauauaUAAAUAUu
chr1:56960782-56960835:- 390 25 UAAAUAUuauauaaauaaugu
chr9:2654169-2654233:+ 408 27 UACCAccuguacaUACAUugu
chr6:18225280-18225377:- 413 31 AAUugguuguauaUaaagUUU
chr1:114306972-114307011:- 430 20 UuccuuauauauaUGUAuaug
chr19:57934479-57934515:+ 431 11 uaucuacuguacaUUAUuguA
chr19:4046746-4046783:- 435 13 AUAUAuauauauaaauAAuau
chr18:51681245-51681309:- 437 10 UUcacUguauauaaaCAUAUU
chr7:24728320-24728413:+ 465 20 CaaaaUauauacaUUauauAA
chr3:72427030-72427071:- 476 15 cuAUAuauauauaaAUAUAAA
chr18:61056983-61057017:- 489 1        uguacaUAUAugua
chr5:70863602-70863635:+ 513 4     UUauauauaUAUauaaA
chr18:33688903-33688952:- 544 25 AUUUAguuguacaUUUAACUU
chr18:33688903-33688952:- 544 39 UUAACUUuguauaauAC    
chr17:56050073-56050106:- 546 11 auuAAAUuguacaaCUUuugu
chr17:56050073-56050106:- 546 26 UUuuguauauauaa       
chrX:103439609-103439668:+ 568 51 Uacaguguauauaaa      
chr5:112214067-112214104:- 589 17 ccugUAAuguacaaUUUuaua
chr5:112214067-112214104:- 589 27 acaaUUUuauauaaUUc    
chr17:76420594-76420645:+ 622 8 CCCuauguguacaUACACAau
chr17:30651602-30651639:+ 624 1        uguacaUUCUGUAU
chr16:337541-337595:- 627 29 gUAAAUAuguacaUUUCUcag
chr12:49414180-49414228:- 644 4     CuuuauauaUUCuauau
chr12:49414180-49414228:- 644 13 uauaUUCuauauaaauauaUC
chr10:91533853-91533916:+ 651 29 AUAUAaauguauaUAUuaugc
chr10:8057424-8057461:+ 652 3      cuuguacaUUUCAUCA
chr10:8057424-8057461:+ 652 20 AUCAACUuguauaaAAACUCU
chr9:90323408-90323464:+ 661 17 auguauauauauaUAUGCACu
chr5:174156842-174156883:+ 672 13 AUAUAuauauauaaUAAAAua
chr3:5026592-5026628:+ 681 18 uaUAUauuauauaaauaUauU
chr2:113420848-113420877:+ 690 7  aaUUccuguacaUAUUUCUC
chr1:165877301-165877387:+ 704 32 ACauauAuauauaaaaaAGGA
chr1:109607076-109607109:- 708 8 GAAAccauauauaaUAAuugu
chr17:5336141-5336188:- 723 26 UUUUUUCuguacaaaucuaUU
chr14:31363691-31363729:- 731 15 gauaUUUuguacaUCUUACug
chr8:81433727-81433769:+ 762 21 auCUguCuauauaUAAAuaua
chr20:48808747-48808781:+ 806 22 UAUUauauauauaUAUCua  
chr1:50883660-50883709:- 813 39 CuauacauauauaUaua    
chr13:77580536-77580586:- 842 9 UaaaccauauacaUucuuUUg
chr6:17660797-17660836:- 884 7  gauauauauauaauuucuua
chr6:130461557-130461596:+ 887 30 AAACAUguauauaaaa     
chr5:60841380-60841412:+ 889 13 AUAACAUuauauaUAUuauau
chr4:124324656-124324689:+ 894 17 uauUUUauguauaaaUcacAA
chr4:122738023-122738050:+ 895 11 auCUGUauauauaacuAuuaA
chr1:76260444-76260493:+ 925 21 aauaAAUuauauaaUUAuacA
chr1:207540481-207540547:+ 938 44 AuauaUguauauaUAAAUuau
chr1:113156132-113156178:- 941 33 AAUCACauauacaUguAUAa 
chr18:9959874-9959928:+ 952 14 uucaaaauguauaUCCUUAAU
chr17:63107071-63107124:+ 955 40 UUUuaUguauauaUCaauAu 
chr17:33289949-33290012:+ 959 8 aCuuaacuguauaauUUCGuu
chr17:33289949-33290012:+ 959 46 uaaAUauuguacaUAguuaaA
chr15:43031260-43031319:- 973 7  gCCAccuguacaUAaaagUG
chr14:21677316-21677363:- 979 12 AUUCUCCuguauaUUuuaAau
chr13:77618975-77619003:- 984 11 CACacuGuauauaaacauAUC
chr11:3696312-3696354:- 997 29 AuauauauguauaaaUAAAU 
chr15:99507497-99507546:+ 1012 9 CuuuCUGuguauaaauUAUUC
chr15:25594644-25594673:- 1020 12 ggaauacuguauaUUCuauau
chr14:51100716-51100759:- 1033 15 aaucGAAuguauaUUAUuacu
chr12:72317561-72317602:+ 1058 32 UCacuuguauauaaAG     
chr12:6775949-6776003:- 1062 19 AUAUAuauauauaaauAUAUU
chr7:141356610-141356633:- 1148 15 auaucuguauauaUc      
chr6:90584068-90584103:+ 1159 13 UUUUAUCuguauaaaACUUuu
chr6:84567159-84567211:+ 1162 1        uguacaaaugUAUC
chr6:84567159-84567211:+ 1162 41 UuauuuguauauaaauuA   
chr6:82458327-82458370:- 1163 2       guauauaUACAUUUu
chr6:143660942-143660974:+ 1181 21 auAAAUauguauaaaCAU   
chr6:108532770-108532836:- 1186 26 UAUAuucuguauaaaAACAAA
chr5:96370650-96370699:+ 1188 40 UUUAAUguauauaaau     
chr5:83236467-83236511:- 1190 13 uucuUuguauauaUACUuaua
chr5:173385248-173385307:+ 1196 13 caCAuaAuguauaUUUGUuau
chr5:123973333-123973430:- 1209 64 AuauauauauauaUAAAUAUA
chr5:110834796-110834837:- 1211 29 AUCUUuguauauaUUUUUU  
chr4:81210998-81211032:+ 1215 23 AAUUACauauauaaaacu   
chr3:196081706-196081768:- 1235 29 auAuaauuguauaaauauUUA
chr3:196081706-196081768:- 1235 53 AUauauuuauauaauu     
chr2:99241592-99241628:- 1248 15 auAUAAauauauaaAUAUAca
chr2:86719719-86719744:+ 1251 12 cAACUAcuguacaauUUCUu 
chr2:55863250-55863286:- 1255 11 agAUUUcuauauaauAUAAau
chr21:40547456-40547495:- 1287 2       guguauaUUACUUGU
chr1:42645000-42645026:- 1307 11 AAauauauguacaaaaaUUac
chr19:52516837-52516875:- 1345 27 UAAAUUuuauauaaAUAA   
chr17:56078460-56078525:- 1370 38 UAAGuuauauauaUGuauuua
chr15:59955490-59955541:- 1401 20 ggguuuGuauauaUGUAuaua
chr14:52195611-52195658:+ 1414 19 uACUCuguguauaUAUuauac
chr14:31363098-31363130:- 1416 1        uauauaaAAugCau
chr12:97361730-97361764:+ 1437 10 UAUacuguauauaUUAUUuau
chr12:65641705-65641737:+ 1444 20 UAUAUAAuauauaaaguaA  
chr12:112465105-112465168:- 1458 41 AAAAAaauauauaUAUAuaua
chr12:111158817-111158863:- 1459 26 CAUAGaguauauaacCUucAU
chr10:89514018-89514042:- 1483 1        uauauaUCcaCacA
chr10:70026928-70026957:- 1485 3      gauguauaUacugUga
chrX:107330670-107330703:- 1515 17 AUUCAAauguauaUAUUUuau
chr9:125669243-125669314:- 1531 43 auGUGUauauauaUUuauaug
chr7:129069842-129069895:+ 1578 21 AUAuacAuauauaUauauauA
chr7:104753818-104753839:+ 1584 7  AUAAACuguauaUUUCAUAU
chr6:109002500-109002542:+ 1620 9 AUAUAAauguauaaAUAuauu
chr5:151186105-151186148:+ 1642 27 acaAUUAuguacaUUAUugca
chr5:133291594-133291643:- 1647 2       guauacaUAAAGGAU
chr5:133291594-133291643:- 1647 21 AUAUUuguguacaaUuaCcuu
chr4:90168589-90168629:- 1657 31 auuauuUuguauaaCu     
chr4:23796313-23796346:- 1666 15 uauuuuauguauaUACUAUac
chr3:153993758-153993788:- 1698 2       auauauaUAUAuaua
chr3:14263010-14263038:+ 1701 9 CcauCAauguauaUUUAUUAU
chr3:136574642-136574669:+ 1706 9 uAUAAAAuauauaauauaUAC
chr2:233725134-233725174:+ 1731 28 uauAAuauauacaUAUAug  
chr2:208627900-208627936:- 1736 30 uauauuauauauaU        
chr2:197700848-197700874:- 1740 10 cucauucuguacaUUGUAACU
chr2:100892541-100892582:- 1752 32 aUAUUAguauauaaUU     
chr21:34731121-34731169:+ 1769 27 cucuauuuauauaUAUAuaua
chr21:34731121-34731169:+ 1769 37 auaUAUAuauauaaaACU   
chr1:31404527-31404553:- 1806 14 uACACgguguacaUuucca  
chr1:244218666-244218714:+ 1807 33 AuauauauauauaUACAUAUA
chr1:203771518-203771567:+ 1825 37 auUUUUguguauaUgugug  
chr1:202103200-202103243:- 1826 19 AUAuguauauauaUUuuaaUU
chr1:118399061-118399085:- 1839 9 cAAAACUuguauaUAUUUCua
chr19:21308585-21308655:+ 1871 36 ugucaCauguauaaUUUGcaa
chr19:12687663-12687700:- 1873 7  gcUGUguguauaUAUAUuua
chr18:48702684-48702740:- 1882 22 UCUUAAcuauauaUauauaCA
chr17:79836821-79836856:- 1887 17 augAGGAuauauaaUuuucau
chr17:56178792-56178839:+ 1896 26 GgaaUUUuguacaUAUuaaAU
chr17:48939967-48940042:- 1901 60 GgauauAuauauaUUGUUucu
chr17:44839982-44840027:- 1904 33 uauaCaauguauaUACcuu  
chr17:30708531-30708563:+ 1915 11 AcauuuGuauauaUAUCugua
chr16:78158043-78158075:+ 1925 21 UUUUAUUuauauaauUUU   
chr14:23316761-23316796:+ 1973 6   uuuaAuguauaUUUUUAUU
chr13:34408418-34408483:+ 1990 44 auauauauauauaUCuguAcu
chr13:107143084-107143136:- 1998 9 Acauauauguauaauauauau
chr12:53874891-53874943:+ 2016 9 AuauauauauauaUAUGuaua
chr12:53807175-53807212:+ 2017 8 auuCUAuuauauaUUUuauau
chr12:53807175-53807212:+ 2017 17 uauaUUUuauauaaaaucCau
chr12:38720821-38720855:+ 2028 11 auacauauauauaUauuuAua
chr10:13672729-13672769:+ 2087 16 uAAUAUUuauauaaaaUAUuu
chr10:13672729-13672769:+ 2087 31 aUAUuuuuauauaUUU     
chrX:153290299-153290347:- 2108 9 AuuuUUauauauaUAUCugua
chr9:97223021-97223056:+ 2122 18 AAAAAUAuauacaacuuuUAU
chr7:44921619-44921668:- 2208 24 CAaaccAuguacaaUUCuugu
chr7:129832427-129832468:- 2229 14 GgguaCauauauaUUUCugua
chr6:17623810-17623834:- 2260 7  cuacUCuguacaUUCUugua
chr6:125413082-125413116:+ 2279 23 auCAUAauauauaaUuca   
chr6:10397937-10397971:- 2287 7  ucucuGuauauaUUUAUUua
chr5:178311611-178311649:+ 2326 10 aaaCauuuguauaaACUACUA
chr5:178311611-178311649:+ 2326 25 CUACUAuuauauaaauAUAa 
chr5:14610994-14611020:+ 2340 4     uuuuauauaUACAuaua
chr5:139651514-139651592:- 2345 17 UCuuauguauauaaauauaua
chr5:139651514-139651592:- 2345 38 uCUuauguauauaaauauaua
chr5:106726390-106726435:- 2364 15 auuuAuguauauaaauuUaua
chr5:106726390-106726435:- 2364 27 aaauuUauauauaUUUAugua
chr5:106726390-106726435:- 2364 39 aUUUAuguauauaa        
chr3:120049585-120049638:- 2440 43 uauACCauauauaUuau    
chr2:241057833-241057868:- 2467 20 aauuauauauauaUGUAUuau
chr2:223459264-223459296:- 2474 20 UAuacUguauauaUGUAUU  
chr2:176793988-176794027:- 2490 18 CAUUAuguauauaaUUAGUuu
chr2:171716615-171716649:+ 2492 18 cUcucUcuauauaUACAugua
chr2:10141513-10141567:+ 2500 41 UAUAUAAuauauaaauaugG 
chr22:39781317-39781346:+ 2504 9 auaAAuauauauaUUUUCuau
chr1:37262889-37262925:- 2557 27 uacuguAuauauaUAU     
chr1:31405734-31405793:- 2561 9 UAAccAauguacaUggGAggc
chr1:2440046-2440076:- 2571 20 auAUAUauauauaaaua    
chr1:207968587-207968654:+ 2596 40 cuauauauguauaaauAugUA
chr1:181059916-181059943:+ 2606 5    UUUuuguauaaaaauguA
chr1:168221973-168222041:+ 2612 43 uugUAAUuguauaaaUAcuca
chr1:158069982-158070040:+ 2617 43 UUUUauauauauaaauauaAA
chr1:118069562-118069596:+ 2626 10 cuauauauguauaUAAAUACA
chr19:21989523-21989551:- 2675 13 uuaUuuguauauaacauuAAA
chr17:42506829-42506863:- 2724 13 guuuuCUuguauaUAUAuaua
chr17:38286358-38286396:+ 2728 26 AUUUAUCuguauaUCUAug  
chr17:29702026-29702084:+ 2733 5    uAAUuauauaUAUAuaua
chr17:29702026-29702084:+ 2733 15 auaUAUAuauauaUUUUUUCC
chr16:3776689-3776712:- 2756 14 UCCCcauuguauaUAa     
chr15:83673921-83673954:- 2771 15 ggggACauauauaUAUGuaua
chr15:52104195-52104231:+ 2785 11 ggcACAUuguauaUAAAUAUU
chr15:52104195-52104231:+ 2785 26 AAUAUUUuguacaUAAA    
chr15:43235143-43235209:- 2792 2       uuauacaaAUAAugc
chr15:43235143-43235209:- 2792 58 uAAAACuuguauaau      
chr15:38645429-38645467:+ 2793 22 UUCUUUUuauauaUCacACUU
chr15:32930204-32930232:+ 2794 10 UUUUAuuuguacaaaUUacUU
chr13:45008045-45008124:- 2844 37 acuAUuuuguacaauAGAgga
chr13:111955770-111955818:+ 2852 3      AAuauauaaAUAuuau
chr13:111955770-111955818:+ 2852 18 UAuuauauauacaUGUUUCUu
chr12:92536989-92537017:- 2862 20 cagUUCAuguauaUU      
chr12:38716261-38716295:+ 2885 23 UUUUUAUuauauaUcaaA   
chr12:102470230-102470257:- 2919 8 GuucauGuauauaaACUUUAU
chr11:48190167-48190238:+ 2939 7  UUgagguguacaaaGUUUGA
chrX:69259213-69259253:+ 3004 29 UAuaauGuauauaaacuG   
chrX:135926992-135927024:- 3038 22 UAUAAAUuguauaaAUU    
chr9:4586214-4586263:+ 3082 16 AUAUauauguauaUAuuuauU
chr9:129643635-129643678:+ 3097 15 AUAuauauauauaauaaAACU
chr9:123548960-123548987:- 3107 13 CUUACAuuguauaUAAuauau
chr8:68107924-68107958:+ 3132 22 UCAUCuguauauaaAauua  
chr8:133823959-133823984:+ 3170 15 CAAUACUuguacaUAAU    
chr7:96811017-96811070:+ 3192 45 aAUAAACuauacaaa      
chr7:95039027-95039081:- 3193 32 uguuuuguauauaUAUUuaca
chr6:43301639-43301673:- 3301 24 auAUAuguauauaUgua    
chr6:26525496-26525527:+ 3315 23 UACuguguauauaau      
chr6:150140828-150140854:- 3332 10 AcucauuuauauaUAUAuaua
chr6:138203235-138203267:+ 3337 7  UGUAcauauauaauAuaCCC
chr5:60050349-60050375:- 3380 6   CAUUuuguauaUUUUUCAA
chr5:42800295-42800327:- 3394 3      cauauauaaCUAUUUu
chr5:176563046-176563079:+ 3406 14 uuAAauauauacaUAUAugua
chr5:150070966-150071011:- 3423 28 UUCAUUUuguauaUUUUuugg
chr5:118730156-118730189:+ 3457 4     UUcuauauaaUUUUcug
chr5:118730156-118730189:+ 3457 18 UUUUcuguguauaaauaauaa
chr4:78088068-78088093:+ 3484 14 UAAAcucuguacaUGUAA   
chr4:38701874-38701915:+ 3503 16 auGUAUauguauaUuuuAUUA
chr3:132257760-132257786:+ 3635 18 uaucAAAuauauaaA      
chr3:121238210-121238242:- 3639 16 UCauauauauauaUAUAuaua
chr3:119541092-119541145:- 3641 37 uauuauauauauaUAUAuaua
chr2:99341809-99341838:- 3654 20 gucuauauauacaUAU     
chr2:99206493-99206520:+ 3655 13 cuaUAUauauauaaaCAUaca
chr2:207940055-207940092:- 3720 19 auAUAUauauauaaaUAUAuu
chr2:188210068-188210127:- 3729 45 uuUCUACuguauaaaCAAAUU
chr2:187375240-187375283:+ 3730 16 uacuuCcuauauaUACUUuau
chr2:187375240-187375283:+ 3730 27 uaUACUUuauauaUUUUUUUA
chr2:183789899-183789939:- 3731 22 guaACACuguauaacauuUAA
chr2:105964969-105965007:+ 3772 23 auauauauauauaUAUAuaua
chr2:100900023-100900054:- 3776 9 auauAuauauauaUAUUUacA
chr21:38406240-38406298:- 3800 1        uauauaUUCUaugu
chr20:48520466-48520519:- 3824 47 auauauauauauaU        
chr1:207968509-207968562:+ 3947 39 UAAAUAuuauacaaUAUACuu
chr1:115314644-115314676:- 3997 10 UAUCUUAuguauaauUCuuau
chr1:111201321-111201365:- 4005 17 AAAGauauauauaauAUUUCA
chr19:58521856-58521888:+ 4018 22 AAAAUUAuguacaUaug    
chr19:58305027-58305054:+ 4020 10 AUAucaCuguauaUUcaUUCA
chr19:58201809-58201842:+ 4022 19 guguguguauauaUAuauacU
chr19:48760435-48760511:+ 4047 35 aguuUuauauauaaCAACuau
chr19:48760435-48760511:+ 4047 68 aCAAuuauauauaUa      
chr19:44126701-44126733:- 4058 4     uuuuauauaUAAuauau
chr19:40500985-40501017:- 4064 22 auAUCUguauauaUCUG    
chr18:33234570-33234602:+ 4118 20 UUAUAUauauauaUUUUUA  
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